I am interested in the evolutionary mechanisms and dynamics of small populations, particularly those involved in invasive plant populations. Most of my research focuses on molecular ecology; using population genetic and phylogenetic approaches to better understand these evolutionary processes that underpin biological invasions.
Current and ongoing research projects
Molecular ecology of plant invasions
Invasive species represent an interesting paradox as they are often genetically depauperate and highly inbred, but seemingly so, without impediment on fitness. Reasons for this paradox are numerous and normally act in different combinations, such as release from natural enemies, pre-adaptations to the new environment, etc. Numerous research projects in my lab (mostly in collaboration with Prof. Dave Richardson and Dr. John Wilson ) are investigating the consequences of invasion histories (human usage, number of independent introductions, propagule pressure, etc.) on population genetic signatures left behind by various species that are naturalized, moderately or highly invasive in South Africa. This research aims to shed light on the genetic consequences faced by invasive species in general.
Plant-microbe interactions during the invasion process
Interactions, such as competition with native species, have been fairly well-studied for many invasive taxa. However, surprisingly little is known about below-ground interactions associated with invasive plants. One of my research interests includes the interactions between nitrogen-fixing bacteria, commonly known as rhizobia, and invasive legumes. The rhizobia - legume relationship could, in some instances, be very taxon-specific and in other very promiscuous. This level of specificity may therefore dictate whether invasive legumes can find suitable bacteria in their newly introduced ranges.
Epigenetic variation and phenotypic plasticity
The Modern Evolutionary Synthesis is based on the assumption that only heritable genetic variation and its random mutational origin explain evolution by natural selection. However, the line between genetic and environmental interactions is blurred by processes such as phenotypic plasticity and epigenetic variation and not well understood. To date no research has been directed towards understanding the importance of epigenetic variation (biochemical modification of DNA building blocks without changes in the actual DNA sequence) in the evolution of natural populations. This may in part be because of the difficulty to disentangle the relative contributions of epigenetic- vs. genetic variation in local adaptation. Ongoing research in my lab is aimed at partially addressing some of these issues.
Molecular Ecology Lab
- Ms. Genevieve Thompson (co-supervisor) — Project title: Molecular ecology of Australian wattles
- Ms. Joice Ndlovu (co-supervisor) — Project title: Molecular ecology of Acacia pycnantha, its antagonists and mutualists.
- Ms. Enelge Gildenhuys — Project title: Unravelling biogeographic uncertainties in the genus Cardiospermum: a multiple species concept approach
- Ms. Haylee Kaplan (co-supervisor) — Project title: Assessing the invasiveness of Acacia stricta in South Africa
- Mr. Dickson Mazibuko (co-supervisor) — Project title: Incidence and distribution of hybrid swarms in Prosopis species in South Africa
- Ms. Nokuthula Mbanyana — Project title: Phylogeography of the Southern African ant genus Ocymyrmex
- Ms. Wafeeka Vardien — Project title: Invasion genetics of Lantana camara in Kruger National Park
Post-doctoral fellows hosted
- Dr Cecile Berthouly-Salazar — Landscape genetics of invasive birds in South Africa (2010-2012)
- Dr Natasha Mavengere — The impact of invasive legumes on rhizobial-legume ecological network interactions (2011-2013)
- Dr Heidi Hirsch — Molecular ecology of the invasive silver wattle, Acacia dealbata: A global perspective. On-going.
- Hulme, P.E. and Le Roux, J.J. (2016) Invasive species shape evolution. Science 352: 422-422.
- Thompson, G.D., Bellstedt, D.U., Richardson, D.M., Wilson, J.R.U. and Le Roux, J.J. (2016) Genetic diversity and structure suggest an introduction history characterised by varying propagule pressure for the globally invasive tree Paraserianthes lophantha. Tree Genetics and Genomes 12: 1-9.
- Rejmánek, M., Huntley, B.J., Le Roux, J.J. and Richardson, D.M. (2016) A rapid survey of the invasive plant species in western Angola. African Journal of Ecology. DOI: 10.1111/aje.12315
- Le Roux, J.J., Mavengere, N. and Ellis, A.G. (2016) The structure of legume-rhizobium interaction networks and their response to tree invasions. AoB PLANTS DOI: 10.1093/aobpla/plw038
- Gildenhuys, A., Ellis, A.G., Carrol, S.P., Le Roux, J.J. (2015) Combining known native range distributions and phylogeny to resolve biogeographic uncertainties of balloon vines (Cardiospermum, Sapindaceae). Diversity and Distributions 21: 163-174. DOI: 10.1111/ddi.12261
- Le Roux, J.J., Foxcroft. L.C., Herbst, M. and MacFayden, S. (2015) Genetic analysis shows low levels of hybridization between African wildcats (Felis silvestris lybica) and domestic cats (F. s. catus) in South Africa. Ecology and Evolution 5: 288-299.
- Víla M., Rohr, R.P., Espinar J.L., Hulme, P.E., Pergl, J. Schaffner, U., Le Roux, J.J. and Pyšek, P. (2015) Explaining the variation in impacts of invasive plants on local-scale species richness: the role of phylogenetic relatedness. Global Ecology and Biogeography 24: 139-146
- Thompson, G.D., Bellstedt, D.U., Richardson, D.M., Wilson, J.R.U. and Le Roux, J.J. (2015) A tree well-travelled: global genetic structure of the invasive tree Acacia saligna. Journal of Biogeography 42: 305-314
- Rubinoff, D. San Jose, M., Johnson, P., Wells, R., Osborne, K. and Le Roux, J.J. (2015) Ghosts of glaciers and the disjunct distribution of a threatened California moth (Euproserpinus euterpe). Biological Conservation 184: 278-289.
- Richardson, Le Roux, J.J. and Wilson, J.R.U. (2015) Australian acacias as invasive species: lessons to be learnt from regions with long planting histories. Southern Forests 77: 3139.
- Gildenhuys, A., Ellis, A.G., Carrol, S.P. and Le Roux, J.J. (2015) From the Neotropics to the Namib: evidence for rapid ecological divergence following extreme long-distance dispersal. Botanical Journal of the Linnean Society 179: 477486.
- Novoa, A., Le Roux, J.J., Robertson, M.P., Wilson, J.R.U. and Richardson, D.M. (2015) Introduced and invasive cactus species: a global review. AoB Plants DOI: 10.1093/aobpla/plu078
- Crous, P.W., Wingfield, M.J., Le Roux, J.J., Richardson, D.M., Strasberg, D., Shivas, R.G., Alvarado, P., Edwards, J., Moreno, G., Sharma, R., Sonawane, M.S., Tan, Y.P., Altés, A., Barasubiye, T., Barnes, C.W., Blanchette, R.A., Boertmann, D., Bogo, A., Carlavilla, J.R., Cheewangkoon, R., Daniel, R., de Beer, Z.W., Yáñez-Morales, M. de Jesús, Duong, T.A., Fernández-Vicente, J., Geering, A.D.W., Guest, D.I., Held, B.W., Heykoop, M., Hubka, V., Ismail, A.M., Kajale, S.C., Khemmuk, W., Kolařík, M., Kurli, R., Lebeuf, R., Lévesque, C.A., Lombard, L., Magista, D., Manjón, J.L., Marincowitz, S., Mohedano, J.M., Nováková, A., Oberlies, N.H., Otto, E.C., Paguigan, N.D., Pascoe, I.G., Pérez-Butrón, J.L., Perrone, G., Rahi, P., Raja, H.A., Rintoul, T., Sanhueza, R.M.V., Scarlett, K., Shouche, Y.S., Shuttleworth, L.A., Taylor, P.W.J., Thorn, R.G., Vawdrey, L.L., Solano-Vidal, R., Voitk, A., Wong, P.T.W., Wood, A.R., Zamora, J.C. and Groenewald, J.Z. (2015) Fungal Planet description sheets: 371399. Persoonia 35: 264-327.
- Kaplan H., van Niekerk, A., Le Roux, J.J., Richardson, D.M. and Wilson, J.R.U. (2014) Incorporating risk mapping at multiple spatial scales into eradication management plans. Biological Invasions 16: 691703.
- Mavengere, N.R., Ellis, A.G. and Le Roux, J.J. (2014) Burkholderia aspalathi sp. nov., isolated from root nodules of the South African legume Aspalathus abietina Thunb. International Journal of Systematic and Evolutionary Microbiology 64: 1906-1912.
- Le Roux, J.J., Strasberg, D, Rouget, M., Morden, C., Koordom, M. and Richardson, D.M. (2014) Relatedness defies biogeography: the tale of two island endemics (Acacia koa and A. heterophylla). New Phytologist 204: 230-242.
- Ndlovu, J., Richardson, D.M., Wilson, J.R.U. and Le Roux, J.J. (2013) Co-invasion of South African ecosystems by an Australian legume and its rhizobial symbionts. Journal of Biogeography 40: 12401251.
- Ndlovu, J., Richardson, D.M., OLeary, M., Wilson, J.R.U. and Le Roux, J.J. (2013) Elucidating the native sources of an invasive tree species reveals unexpected native range diversity and structure. Annals of Botany 111: 895904.
- Blignaut, M., Ellis, A.G. and Le Roux, J.J. (2013) Towards an universal plant Amplified Fragment Length Polymorphism (AFLP) protocol. PLoS ONE 8: e61704.
- Vardien, W., Richardson, D.M., Foxcroft, L.C., Wilson, J.R.U. and Le Roux, J.J. (2013) Management history determines gene flow in a prominent invader. Ecography 36: 10321041.
- Geerts, S., Moodley, D., Gaertner, M., Le Roux, J.J., McGeoch, M.A., Muofhe, C., Richardson, D.M. and Wilson, J.R.U. (2013) The absence of fire can cause a lag phase—the invasion dynamics of Banksia ericifolia (Proteaceae). Austral Ecology 8: 931941.
- Hui, C., Richardson, D.M., Pyšek, P., Le Roux, J.J., Kučera, T. and Jarošík, V. (2013) Rising functional modularity with residence time in the co-distribution of vascular plants. Nature Communications 4: 2454.
- Gildenhuys, E., Ellis, A.G., Carroll, S. and Le Roux, J.J. (2013) The ecology, biogeography, history and future of two globally important weeds: Cardiospermum halicacabum Linn. and C. grandiflorum Sw. NeoBiota 19: 4565.
- Berthouly-Salazar, C., Blackburn, T., Gaboriaud, C. van Rensburg, B.J., van Vuuren, B., Hui, C. and Le Roux, J.J. (2013) Long-distance dispersal maximizes evolutionary potential during rapid geographic range expansion. Molecular Ecology 22: 57935804.
- Le Roux, J.J., Richardson, D.M., Wilson, J.R.U. and Ndlovu, J. (2013) Human usage in the native range may determine the future genetic structure of an invasion: insights from Acacia pycnantha. BMC Ecology 13: 37
- Le Roux, J.J., Blignaut, M., Gildenhuys, E., Mavengere, N. and Berthouly-Salazar, C. (2013) The molecular ecology of biological invasions: What do we know about non-additive genetic effects and invasion success? Biological Invasions DOI:10.1007/s10530-013-0568-y
- Berthouly-Salazar, Janse van Rensburg, B., Le Roux, J.J., Jansen van Vuuren, B. and Hui, C. (2012) Spatial sorting drives morphological variation in the invasive bird, Acridotheris tristis. PLoS ONE 7: e38145.
- Berthouly-Salazar, C., Cassey, P., Jansen van Vuuren, B., Janse van Rensburg, B., Hui, C., Gardner, M.G. and Le Roux, J.J. (2012) Development and characterization of 13 new, and cross amplification of 3, polymorphic nuclear microsatellite loci in the common myna (Acridotheres tristis). Conservation Genetic Resources 4: 621624.
- Hardesty B.D., Le Roux, J.J., Rocha, O.J., Meyer, J-Y,Westcott, D. and Wieczorek, A.M. (2012) Getting here from there: testing the paradigm of invasion success. Diversity and Distributions 18: 147-157.
- Harris, C.J., Dormontt, E.E., Le Roux, J.J., Lowe, A. and Leishman, M.R. (2012) No consistent association between changes in genetic diversity and adaptive responses of Australian acacias in novel ranges. Evolutionary Ecology 26: 13451360.
- Kaplan, H., Van Zyl, H.W.F., Le Roux, J.J., Richardson, D.M. and Wilson, J.R.U. (2012) Distribution and management of Acacia implexa (Fabaceae) in South Africa: is eradication an option? South African Journal of Botany 83: 23-35.
- te Beest, M. , Le Roux, J.J. , Richardson, D.M. , Brysting, A.K. , Suda, J. , Kubesová, M. and Pyšek, P. (2012). The more the better? The role of polyploidy in facilitating plant invasions. Annals of Botany 109: 1945.
- Thompson, G.D., Bellstedt, D.U., Byrne, M., Millar, M.A., Richardson, D.M., Wilson, J.R.U. and Le Roux, J.J. (2012) Cultivation shapes genetic novelty in a globally important invader. Molecular Ecology 21: 3187-3199.
- Vardien, W., Richardson, D.M., Foxcroft, L.C., Thompson, G.D, Wilson, J.R.U. and Le Roux, J.J. (2012) Invasion dynamics of Lantana camara L. (sensu lato) in South Africa. South African Journal of Botany 81: 81-94.
- Gibson, M., Richardson, D.M. Marchante, E., Marchante, H., Rodger, J.G., Stone, G.N., Byrne, M., Fuentes-Ramírez, A., George, N., Harris, C., Johnson, S.D., Le Roux, J.J., Miller, J.T., Murphy, D.J. Pauw, A., Prescott, M.N., Wandrag, E.M. and Wilson, J.R.U. (2011) Reproductive ecology of Australian acacias: important mediator of invasive success? Diversity and Distributions 17: 911-933.
- Le Roux J.J., Brown G., Byrne M., Ndlovu, J., Richardson, D.M., Thompson, G.D. and Wilson, J.R.U. (2011) Phylogeographic consequences of different introduction histories of invasive Australian Acacia species and Paraserianthes lophantha (Fabaceae) in South Africa. Diversity and Distributions 17: 861-871.
- Richardson, D.M., Carruthers, J., Hui, C., Impson, F.A.C., Miller, J.T., Robertson, M.P., Rouget, M., Le Roux, J.J. and Wilson, J.R.U. (2011) Human-mediated introductions of Australian acacias — a global experiment in biogeography. Diversity and Distributions 17: 771-787.
- Rodríguez-Echeverría, S., Le Roux, J.J., Crisóstomo, J.A. and Ndlovu, J. (2011) Jack-of-all-trades and master of many? How does associated rhizobial diversity influence the colonization success of Australian Acacia species? Diversity and Distributions 17: 946-957.
- Thompson, G.D., Robertson, M.P., Webber, B.L., Richardson, D.M., Le Roux, J.J. and Wilson, J.R.U. (2011) Predicting the sub-specific identity of invasive species using distribution models: Acacia saligna as an example. Diversity and Distributions 17: 1001-1014.
- Webber, B.L., Yates, C.J., Le Maitre, D.C., Scott, J.K., Kriticos, D.J., Ota, N., McNeill, A., Le Roux, J.J. and Midgley, G.F. (2011) Modelling horses for novel climate courses: insights from projecting potential distributions of native and alien Australian acacias with correlative and mechanistic models. Diversity and Distributions 17: 978-1000.
- Le Roux, J.J., Wieczorek, A.M., Tran, C.T. and Vorsino, A. (2010) Disentangling the dynamics of invasive fireweed (Senecio madagascariensis Poir. species complex) in the Hawaiian Islands. Biological Invasions 12: 2251-2264.
- Le Roux, J.J., Geerts, S., Ivey, P., Krauss, S., Richardson, D.M., Suda, J. and Wilson, J.R.U. (2010) Molecular systematics and ecology of invasive Kangaroo Paws in South Africa: management implications for a horticulturally important genus. Biological Invasions 12: 3989-4002.
- Le Roux, J.J. and Wieczorek, A.M. (2009) Molecular systematics and population genetics of biological invasions: towards a better understanding of invasive species management. Annals of Applied Biology 154: 1- 17.
- Le Roux, J.J. and Rubinoff, D. (2009) Molecular data reveals California as the potential source of an invasive leafhopper species, Macrosteles sp. nr. severini Hamilton, transmitting the aster yellows phytoplasma in Hawaii. Annals of Applied Biology 154: 429-439.
- Zenni, R.D., Wilson, J.R.U., Le Roux, J.J. and Richardson, D.M. (2009) Evaluating the invasiveness of Acacia paradoxa in South Africa. South African Journal of Botany 75: 485-496.
- Thompson, G.D. Le Roux, J.J., Millar, M.A., Wilson, J.R., Richardson, D.M., Byrne, M. (2009) The Port Jackson 5. South African Journal of Botany 75: 441-442.
- Le Roux, J.J. and Wieczorek, A.M. (2008) Isolation and characterization of polymorphic microsatellite markers from velvet tree, Miconia calvescens DC. (Melastomataceae). Molecular Ecology Resources 8: 961-964.
- Le Roux, J.J., Meyer J-Y, and Wieczorek A.M. (2008) Genetic diversity and structure of the invasive tree Miconia calvescens in Pacific islands. Diversity and Distributions 14: 935-948.
- Rubinoff, D. and Le Roux, J.J. (2008) Evidence of Repeated and Independent Saltational Evolution in a Peculiar Genus of Sphinx Moths (Proserpinus: Sphingidae). PLoS ONE 3: e4035.
- Le Roux, J.J., Wieczorek, A.M., Wright, M.G. and Tran, C.T. (2007) Super-genotype, global monoclonality defies the odds of nature. PLoS ONE 2(7): e590.
- Le Roux, J.J., Wieczorek, A.M., Ramadan, M.M. and Tran, C.T. (2006) The native provenance of invasive fireweed (Senecio madagascariensis Poir.) in the Hawaiian islands as inferred from phylogenetic analysis. Diversity and Distributions 12: 694702.
- Le Roux, J.J. and Wieczorek, A.M. (2006) Isolation and characterization of polymorphic microsatellite markers from fireweed, Senecio madagascariensis Poir. (Asteraceae). Molecular Ecology Notes 7: 327-329.
- Le Roux, J.J., Hall A.N., Jaftha J.B. and Steyn, P.L. (2001) A Novel Bacillus species isolated from leguminous root-nodules. In: Proceedings of the 40th Annual Conference of the Microscopy Society of Southern Africa: Microscopy Society of Southern Africa, pp. 43-44.