University of Stellenbosch Flow Cytometry Unit

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Training & Consultation
    Training
    Training on the FACSCalibur, on either an individual or group basis, is required before users can operate instruments independently.
    Contact Mandi Alblas or John Michie to sign up for training. There is a R200 fee for training. The class size is limited to four students. Users will receive
    • Introduction to Flow Cytometry: A Learning Guide (© BD Biosciences)
    • Flow Unit User's Handbook
    • A CD containing overviews of Becton Dickinson FACStation and CELLQuest Pro software and Joe Trotter's WinMDI program
    • A Certificate of Competance

    Dates & Times
    • Tuesdays 10:00 - 12:00
    • Wednesdays 09:00 - 11:00

    Refresher Training
    Those who feel they need a refresher, should take the Wednesday class. Please contact Mandi Alblas or John Michie to reserve a slot in the class.
    Consultation on FACSCalibur
    Consultation regarding your experiment design, instrument operation and setup for acquisition, quality control and data analysis software on the FACSCalibur is available. Please internet book one of the FACSCaliburs and request an appointment with Mandi Alblas or John Michie.

    Assisted/Supervised Use
    Investigators can be assisted in using the instrument based on availability, and will be provided information for the preparation of samples for cytometric analysis.
    Samples must be prepared in the Investigator's laboratory and must be in good condition prior to loading onto the instrument.
    Specimens should be examined under a microscope (“garbage in, garbage out” is a well known dictum in flow cytometry).
    Guidelines for sample preparation will be discussed prior to preparation, and well before presentation of the samples to the cytometers.
    Since the Unit is minimally staffed, if it becomes necessary to fully assist the user until s/he is able to be completely independent, then the charges that will apply are those listed for "Assisted Use" in the Fees Structure.

    Assay/Protocol Development
    An Investigator’s existing sample preparation may not be appropriate for flow cytometric analysis. It will then be necessary to research the literature for a method or to develop a novel method of preparation. In these instances, the Unit staff will be available for collaboration with the Investigator. A Investigator who wishes this type of collaboration must familiarize him or herself as much as possible with preparative techniques for flow cytometric analysis prior to meeting with the staff. Books on theoretical and practical aspects of flow cytometry are available at various Academic Institutes' libraries in the Western Cape. A list of them can be viewed here.

    Your First Visit

    • Sign up for help with first run with Mandi Alblas or John Michie
    • A subdirectory will be created for temporary storage of your data on the computer
    • Confirm experimental design (controls etc.) with Flow Cytometry Unit staff
    • Internet book one of the FACSCaliburs
    • Review CELLQuest Pro CD-ROM (acquisition & analysis movie)
    • Start with ~10 samples in 0.5 - 1.0 ml volume (0.5 - 1.0 x 106 cells per ml)
    • Cells must be in suspension
    • Samples must be examined under a microscope prior to acquisition - remember - "garbage in, garbage out"
    • Samples must be in Falcon tubes #2052
    • Bring a blank CD-R or CD-RW to burn acquired data with Roxio Toast Lite software
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